A viral disease, or viral infection, occurs when an organism’s body is invaded by pathogenic viruses.
The infectious virus particles, virions, attach to and enter susceptible cells.
Virus species within the same family generally share the same features:
Basic structural characteristics, such as genome type, virion shape and replication site.
Double-stranded DNA families: three are non-enveloped: Adenoviridae, Papillomaviridae and Polyomaviridae, and two are enveloped:Herpesviridae and Poxviridae.
All non-enveloped families have icosahedral nucleotide capsids.
Partly double-stranded DNA viruses: Hepadnaviridae :are enveloped.
One family of single-stranded DNA viruses infects humans: Parvoviridae.
These viruses are non-enveloped.
Positive single-stranded RNA families: three non-enveloped Astroviridae, Caliciviridae and Picornaviridae and four enveloped Coronaviridae, Flaviviridae, Retroviridae and Togaviridae.
Negative single-stranded RNA families: Arenaviridae, Bunyaviridae, Filoviridae, Orthomyxoviridae, ParamyxoviridaeParamyxoviridae and Rhabdoviridae. All are enveloped with helical nucleocapsids.
Double-stranded RNA genome: Reoviridae.
The Hepatitis D virus has not yet been assigned to a family, but is clearly distinct from the other families infecting humans.
Viruses infect humans and not be associated with disease: that have Anelloviridae and the genus Dependovirus are non-enveloped single-stranded DNA viruses.
As a general rule, DNA viruses replicate within the cell nucleus while RNA viruses replicate within the cytoplasm: Exceptions, poxviruses replicate within the cytoplasm and orthomyxoviruses and hepatitis D virus (RNA viruses) replicate within the nucleus.
Bunyaviridae, Orthomyxoviridae, Arenaviridae, and Reoviridae are all RNA viruses.
The Viruses transmitted almost exclusively by arthropods: Bunyavirus, Flavivirus, and Togavirus.
Some Reoviruses are transmitted from arthropod vectors, and al all are RNA viruses.
One family of enveloped viruses causes gastroenteritis-Coronaviridae.
All other viruses associated with gastroenteritis are non-enveloped.
Categories of virus by groups:
I – dsDNA
II – ssDNA
III – dsRNA
IV – positive-sense ssRNA
V – negative-sense ssRNA
VI – ssRNA-RT
VII – dsDNA-RT
Clinically important virus families and species with characteristics
Family
Baltimore group Important species
Adenoviridae=Adenovirus
Herpesviridae I-Herpes simplex, type 1, Herpes simplex, type 2, Varicella-zoster virus, Epstein–Barr virus, Human cytomegalovirus, Human herpesvirus, type 8
Papillomaviridae Human papillomavirus
Polyomaviridae-BK virus, JC virus N
Poxviridae Smallpox, Monkey pox
Parvoviridae-Parvovirus B19
ReoviridaeIII-Rotavirus, Orbivirus, Coltivirus, Banna virus
AstroviridaeIV-Human astrovirus
Caliciviridae IV Norwalk virus
Coronaviridae IV-Human coronavirus 229E, Human coronavirus NL63, Human coronavirus OC43, Human coronavirus HKU1, Middle East respiratory syndrome-related coronavirus, Severe acute respiratory syndrome coronavirus,Severe acute respiratory syndrome coronavirus 2, COVID-19
Flaviviridae IV-Hepatitis C virus, yellow fever virus, dengue virus,[West Nile virus, TBE virus, Zika virus
Hepeviridae IV Hepatitis E virus
Matonaviridae IV Rubella virus
Picornaviridae IV-coxsackievirus, hepatitis A virus, poliovirus,rhinovirus
Arenaviridae V Lassa virus
Bunyaviridae V Crimean-Congo hemorrhagic fever virus, Hantaan virus
FiloviridaeV Ebola virus,Marburg virus
Orthomyxoviridae V Influenza virus
ParamyxoviridaeV Measles virus, Mumps virus,Parainfluenza virus
PneumoviridaeV Respiratory syncytial virus
RhabdoviridaeV Rabies virus
Unassigned V Hepatitis D
Retroviridae VI HIV
Hepadnaviridae VII Hepatitis B virus
The clinical manifestations of viruses differ substantially among species within the same family:
Reactivation of latent viruses common cause of infections in hematopoietic stem cell transplant patients, such as herpes simplex virus types 1 and 2, vermicelli zoster virus and cytomegalovirus.
Viroporins are small, highly hydrophobic proteins derived from viruses, which interact with membranes to modify the host cell’s permeability to ions or other small molecules.
Several viroporins are observed to localize to the Golgi apparatus and other cytoplasmic structures during viral infection.
CMV infections common among the most common viral infections in the immunocompromised host.
Viruses infect living cells and co-opt the host replication process to produce viral progeny that infects other cells.
For viruses to thrive they must overcome the regulatory components of the cell cycle and avoid a apptosis and the hosts immune surveillance.
Chronic infections are associated with the development of several types of cancer.
Virus- associated malignant tumors account for 10 to 15% of all human cancers worldwide.
A viral disease, or viral infection, occurs when an organism’s body is invaded by pathogenic viruses.
The infectious virus particles, virions, attach to and enter susceptible cells.
Virus species within the same family generally share the same features:
Basic structural characteristics, such as genome type, virion shape and replication site.
Double-stranded DNA families: three are non-enveloped: Adenoviridae, Papillomaviridae and Polyomaviridae, and two are enveloped:Herpesviridae and Poxviridae.
All non-enveloped families have icosahedral nucleotide capsids.
Partly double-stranded DNA viruses: Hepadnaviridae :are enveloped.
One family of single-stranded DNA viruses infects humans: Parvoviridae.
These viruses are non-enveloped.
Positive single-stranded RNA families: three non-enveloped Astroviridae, Caliciviridae and Picornaviridae and four enveloped Coronaviridae, Flaviviridae, Retroviridae and Togaviridae.
Negative single-stranded RNA families: Arenaviridae, Bunyaviridae, Filoviridae, Orthomyxoviridae, ParamyxoviridaeParamyxoviridae and Rhabdoviridae. All are enveloped with helical nucleocapsids.
Double-stranded RNA genome: Reoviridae.
The Hepatitis D virus has not yet been assigned to a family, but is clearly distinct from the other families infecting humans.
Viruses infect humans and not be associated with disease: that have Anelloviridae and the genus Dependovirus are non-enveloped single-stranded DNA viruses.
As a general rule, DNA viruses replicate within the cell nucleus while RNA viruses replicate within the cytoplasm: Exceptions, poxviruses replicate within the cytoplasm and orthomyxoviruses and hepatitis D virus (RNA viruses) replicate within the nucleus.
Bunyaviridae, Orthomyxoviridae, Arenaviridae, and Reoviridae are all RNA viruses.
The Viruses transmitted almost exclusively by arthropods: Bunyavirus, Flavivirus, and Togavirus.
Some Reoviruses are transmitted from arthropod vectors, and al all are RNA viruses.
One family of enveloped viruses causes gastroenteritis-Coronaviridae.
All other viruses associated with gastroenteritis are non-enveloped.
Categories of virus by groups:
I – dsDNA
II – ssDNA
III – dsRNA
IV – positive-sense ssRNA
V – negative-sense ssRNA
VI – ssRNA-RT
VII – dsDNA-RT
Clinically important virus families and species with characteristics
Family
Baltimore group Important species
Adenoviridae=Adenovirus
Herpesviridae I-Herpes simplex, type 1, Herpes simplex, type 2, Varicella-zoster virus, Epstein–Barr virus, Human cytomegalovirus, Human herpesvirus, type 8
Papillomaviridae Human papillomavirus
Polyomaviridae-BK virus, JC virus N
Poxviridae Smallpox, Monkey pox
Parvoviridae-Parvovirus B19
ReoviridaeIII-Rotavirus, Orbivirus, Coltivirus, Banna virus
AstroviridaeIV-Human astrovirus
Caliciviridae IV Norwalk virus
Coronaviridae IV-Human coronavirus 229E, Human coronavirus NL63, Human coronavirus OC43, Human coronavirus HKU1, Middle East respiratory syndrome-related coronavirus, Severe acute respiratory syndrome coronavirus,Severe acute respiratory syndrome coronavirus 2, COVID-19
Flaviviridae IV-Hepatitis C virus, yellow fever virus, dengue virus,[West Nile virus, TBE virus, Zika virus
Hepeviridae IV Hepatitis E virus
Matonaviridae IV Rubella virus
Picornaviridae IV-coxsackievirus, hepatitis A virus, poliovirus,rhinovirus
Arenaviridae V Lassa virus
Bunyaviridae V Crimean-Congo hemorrhagic fever virus, Hantaan virus
FiloviridaeV Ebola virus,Marburg virus
Orthomyxoviridae V Influenza virus
ParamyxoviridaeV Measles virus, Mumps virus,Parainfluenza virus
PneumoviridaeV Respiratory syncytial virus
RhabdoviridaeV Rabies virus
Unassigned V Hepatitis D
Retroviridae VI HIV
Hepadnaviridae VII Hepatitis B virus
The clinical manifestations of viruses differ substantially among species within the same family:
Type Family Transmission Diseases Treatment Prevention
Adenovirus
droplet contact transmission
fecal-oral
venereal
direct eye contact
gastroenteritis
keratoconjunctivitis
pharyngitis
pharyngoconjunctival fever
Prevention
Adenovirus vaccine
hand washing
covering mouth when coughing or sneezing
avoiding close contact with the sick
CoxsackievirusPicornaviridae
fecal-oral
respiratory droplet contact
Hand, foot and mouth disease
pleurodynia
aseptic meningitis
pericarditis
myocarditis
Prevention CoxsackievirusPicornaviridae
None
hand washing
covering mouth when coughing/sneezing
avoiding contaminated food/water
improved sanitation
CytomegalovirusHerpesviridae
vertical transmission
bodily fluids
infectious mononucleosis
Cytomegalic inclusion disease
Premature birth
liver, lung and spleen diseases in the newborn
Small size at birth
Small head size
congenital seizures in the newborn
Treatment
ganciclovir
cidofovir
foscarnet
Prevention
hand washing
avoid sharing food and drinks with others
safe sex
Epstein–Barr virusHerpesviridae
saliva
infectious mononucleosis
Burkitt’s lymphoma
Hodgkin’s lymphoma
nasopharyngeal carcinoma
Prevention-avoiding close contact with the sick
Hepatitis A virusPicornaviridae
fecal-oral transmission
acute hepatitis
Immunoglobulin (post-exposure prophylaxis)
Hepatitis A vaccine
avoiding contaminated food/water
improved sanitation
Hepatitis B virusHepadnaviridae
Transmitted by bodily fluids
Vertical and sexual transmission
acute hepatitis
chronic hepatitis
hepatic cirrhosis
hepatocellular carcinoma
Lamivudine therapy
immunoglobulins
Adefovir
Entecavir
Pegylated interferon alfa
Hepatitis B vaccine
immunoglobulin (perinatal and post-exposure prophylaxis)
avoiding shared needles/syringes
safe sex
Hepatitis C virusFlaviviridae
blood
sexual contact
acute hepatitis
chronic hepatitis
hepatic cirrhosis
hepatocellular carcinoma
Ribavirin
Pegylated interferon alfa
avoiding shared needles/syringes
safe sex
Herpes simplex virus, type 1Herpesviridae
direct contact
saliva
herpes labialis, cold sores– can recur by latency
gingivostomatitis in children
tonsillitis & pharyngitis in adults
keratoconjunctivitis
acyclovir
famciclovir
foscarnet
penciclovir
avoiding close contact with lesions
safe sex
Herpes simplex virus, type 2Herpesviridae
sexual contact
vertical transmission
Skin vesicles, mucosal ulcers, Oral and/or genital
Can be latent
Aseptic meningitis
acyclovir
famciclovir
foscarnet
penciclovir
cidofovir
avoiding close contact with lesions
safe sex
HIVRetroviridae
sexual contact
blood
breast milk
vertical transmission
AIDS
HAART,such as protease inhibitors and reverse-transcriptase inhibitors
zidovudine (perinatally)
blood product screening
safe sex
avoiding shared needles/syringes
Human coronavirus 229E
droplet contact
fomites
common cold
pneumonia
bronchiolitis
Human coronavirus
Coronaviridae
droplet contact
common cold
rhinitis
bronchitis
bronchiolitis
pneumonia
croup
Human coronavirus
Human herpesvirus, type 8Herpesviridae
Saliva
Sexual
Kaposi sarcoma
multicentric Castleman disease
primary effusion lymphoma
many in evaluation-stage
avoid close contact with lesions
safe sex
Human papillomavirusPapillomaviridae
direct contact
sexual contact
vertical transmission
(common, flat, plantar and anogenital warts, laryngeal papillomas, epidermodysplasia verruciformis)
Malignancies (cervical carcinoma,squamous cell carcinomas)
liquid nitrogen
laser vaporization
cytotoxic chemicals
interferon
cidofovir
HPV vaccine
avoiding close contact with lesions
safe sex
Influenza virusOrthomyxoviridae
droplet contact
influenza
Reye syndrome
amantadine
rimantadine
zanamivir
oseltamivir
influenza vaccine
amantadine
rimantadine
hand washing
covering mouth when coughing/sneezing
avoiding close contact with the sick
Measles virusParamyxoviridae
droplet contact
measles
postinfectious encephalomyelitis
MMR vaccine
quarantining the sick
avoiding contact with the sick
Middle East respiratory syndrome-related coronavirus (MERS-CoV) Coronaviridae
close human contact
Mumps virusParamyxoviridae
droplet contact
MMR vaccine
avoiding close contact with the sick
Parainfluenza virusParamyxoviridae
droplet contact
croup
pneumonia
bronchiolitis
common cold
hand washing
covering mouth when coughing/sneezing
PoliovirusPicornaviridae
fecal-oral
poliomyelitis
Polio vaccine
avoiding contaminated food and water
improved sanitation
Rabies virusRhabdoviridae
animal bite
droplet contact
rabies encephalitis
Post-exposure prophylaxis
rabies vaccine
avoiding rabid animals
Respiratory syncytial virusPneumoviridae
droplet contact
hand to mouth
bronchiolitis
pneumonia
influenza-like syndrome
severe bronchiolitis with pneumonia
ribavirin
hand washing
avoiding close contact with the sick
palivizumab in high risk individuals
covering mouth when coughing/sneezing
Vaccine
Rubella virusTogaviridae
Respiratory and droplet contact
congenital rubella
German measles
MMR vaccine
avoiding close contact with the sick
Severe acute respiratory syndrome coronavirus (SARS-CoV)Coronaviridae
droplet contact
severe acute respiratory syndrome (SARS)
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Coronaviridae
droplet contact
coronavirus disease 2019 (COVID-19)
hand washing
covering mouth when coughing or sneezing
social distancing
Varicella-zoster virusHerpesviridae
droplet contact
direct contact
chickenpox
herpes zoster
Congenital varicella syndrome
Varicella:
acyclovir
famciclovir
valacyclovir
Zoster:
acyclovir
famciclovir
Varicella:
varicella vaccine
varicella-zoster immunoglobulin
avoiding close contact with the sick
Zoster:
vaccine,varicella-zoster immunoglobulin